Serveur d'exploration sur l'Université de Trèves

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Determination of free DNA in soils

Identifieur interne : 001C57 ( Main/Exploration ); précédent : 001C56; suivant : 001C58

Determination of free DNA in soils

Auteurs : Jürgen Niemeyer [Allemagne] ; Frank Gessler [Allemagne]

Source :

RBID : ISTEX:F7C00836578BCC7AA64F1E617900A5617B4C0240

Descripteurs français

English descriptors

Abstract

The concentration of free DNA in soils has to be determined in order to understand the fate and the transport of extracellular DNA. A protocol for the extraction and determination of free DNA was developed. The procedure uses separation steps, i.e. centrifugation and ultra‐filtration. The free dsDNA was stained with PicoGreen® and determined fluorimetrically. Samples from different soils, different soil horizons, soil waters and under different land use systems were analyzed. It was found that in nearly all samples free DNA was detectable. Free DNA concentrations of up to 1950 ng (g dried sample)—1 could be detected depending on depth, soil type and system of land use.

Url:
DOI: 10.1002/1522-2624(200204)165:2<121::AID-JPLN1111121>3.0.CO;2-X


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI wicri:istexFullTextTei="biblStruct">
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Determination of free DNA in soils</title>
<author>
<name sortKey="Niemeyer, Jurgen" sort="Niemeyer, Jurgen" uniqKey="Niemeyer J" first="Jürgen" last="Niemeyer">Jürgen Niemeyer</name>
</author>
<author>
<name sortKey="Gessler, Frank" sort="Gessler, Frank" uniqKey="Gessler F" first="Frank" last="Gessler">Frank Gessler</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:F7C00836578BCC7AA64F1E617900A5617B4C0240</idno>
<date when="2002" year="2002">2002</date>
<idno type="doi">10.1002/1522-2624(200204)165:2<121::AID-JPLN1111121>3.0.CO;2-X</idno>
<idno type="url">https://api.istex.fr/document/F7C00836578BCC7AA64F1E617900A5617B4C0240/fulltext/pdf</idno>
<idno type="wicri:Area/Istex/Corpus">000830</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">000830</idno>
<idno type="wicri:Area/Istex/Curation">000780</idno>
<idno type="wicri:Area/Istex/Checkpoint">000B66</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">000B66</idno>
<idno type="wicri:doubleKey">1436-8730:2002:Niemeyer J:determination:of:free</idno>
<idno type="wicri:Area/Main/Merge">001F06</idno>
<idno type="wicri:source">INIST</idno>
<idno type="RBID">Pascal:03-0247361</idno>
<idno type="wicri:Area/PascalFrancis/Corpus">000C57</idno>
<idno type="wicri:Area/PascalFrancis/Curation">000258</idno>
<idno type="wicri:Area/PascalFrancis/Checkpoint">000B13</idno>
<idno type="wicri:explorRef" wicri:stream="PascalFrancis" wicri:step="Checkpoint">000B13</idno>
<idno type="wicri:doubleKey">1436-8730:2002:Niemeyer J:determination:of:free</idno>
<idno type="wicri:Area/Main/Merge">001F78</idno>
<idno type="wicri:Area/Main/Curation">001C57</idno>
<idno type="wicri:Area/Main/Exploration">001C57</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title level="a" type="main" xml:lang="en">Determination of free DNA in soils</title>
<author>
<name sortKey="Niemeyer, Jurgen" sort="Niemeyer, Jurgen" uniqKey="Niemeyer J" first="Jürgen" last="Niemeyer">Jürgen Niemeyer</name>
<affiliation wicri:level="4">
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Soil Science/Soil Chemistry, Faculty of Geological Sciences, University of Trier, D‐54286 Trier</wicri:regionArea>
<orgName type="university">Université de Trèves</orgName>
<placeName>
<settlement type="city">Trèves (Allemagne)</settlement>
<region type="land" nuts="1">Rhénanie-Palatinat</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Gessler, Frank" sort="Gessler, Frank" uniqKey="Gessler F" first="Frank" last="Gessler">Frank Gessler</name>
<affiliation wicri:level="3">
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Applied Biotechnology in the Tropics at the University of Goettingen, Kellnerweg 6, 37077 Goettingen</wicri:regionArea>
<placeName>
<region type="land" nuts="2">Basse-Saxe</region>
<settlement type="city">Göttingen</settlement>
</placeName>
</affiliation>
<affiliation wicri:level="1">
<country wicri:rule="url">Allemagne</country>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series>
<title level="j">Journal of Plant Nutrition and Soil Science</title>
<title level="j" type="abbrev">Z. Pflanzenernähr. Bodenk.</title>
<idno type="ISSN">1436-8730</idno>
<idno type="eISSN">1522-2624</idno>
<imprint>
<publisher>WILEY‐VCH Verlag GmbH</publisher>
<pubPlace>Weinheim</pubPlace>
<date type="published" when="2002-04">2002-04</date>
<biblScope unit="volume">165</biblScope>
<biblScope unit="issue">2</biblScope>
<biblScope unit="page" from="121">121</biblScope>
<biblScope unit="page" to="124">124</biblScope>
</imprint>
<idno type="ISSN">1436-8730</idno>
</series>
<idno type="istex">F7C00836578BCC7AA64F1E617900A5617B4C0240</idno>
<idno type="DOI">10.1002/1522-2624(200204)165:2<121::AID-JPLN1111121>3.0.CO;2-X</idno>
<idno type="ArticleID">JPLN1111121</idno>
</biblStruct>
</sourceDesc>
<seriesStmt>
<idno type="ISSN">1436-8730</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Chemical concentration</term>
<term>Concentration distribution</term>
<term>Concentration measurement</term>
<term>DNA</term>
<term>Determination</term>
<term>Experimental study</term>
<term>Fluorescence spectrometry</term>
<term>Fluorescent labelling</term>
<term>Free form</term>
<term>Laboratory measurement</term>
<term>Luvisol</term>
<term>Method study</term>
<term>Mineral soils</term>
<term>PicoGreen</term>
<term>Podzol</term>
<term>SOIL TESTING</term>
<term>free DNA</term>
<term>lysimeter</term>
<term>soil</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr">
<term>ANALYSE DE SOL</term>
<term>Analyse quantitative</term>
<term>Centrifugation</term>
<term>Composé fluorescent</term>
<term>Concentration chimique</term>
<term>DNA</term>
<term>DNA bicaténaire</term>
<term>Distribution concentration</term>
<term>Détermination</term>
<term>Etude expérimentale</term>
<term>Etude méthode</term>
<term>Extracellulaire</term>
<term>Fertilisation minérale</term>
<term>Fertilisation organique</term>
<term>Forme libre</term>
<term>Horizon sol</term>
<term>Luvisol</term>
<term>Lysimètre</term>
<term>Lysimétrie</term>
<term>Marquage fluorescent</term>
<term>Mesure au laboratoire</term>
<term>Mesure concentration</term>
<term>Occupation sol</term>
<term>PicoGreen</term>
<term>Podzol</term>
<term>Procédé séparation</term>
<term>Profil profondeur</term>
<term>Profil pédologique</term>
<term>Protocole expérimental</term>
<term>Réactif analytique</term>
<term>Sol minéral</term>
<term>Solution édaphique</term>
<term>Spectrométrie fluorescence</term>
<term>Type de sol</term>
<term>Ultrafiltration</term>
</keywords>
<keywords scheme="Wicri" type="topic" xml:lang="fr">
<term>Analyse quantitative</term>
<term>Type de sol</term>
</keywords>
</textClass>
<langUsage>
<language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">The concentration of free DNA in soils has to be determined in order to understand the fate and the transport of extracellular DNA. A protocol for the extraction and determination of free DNA was developed. The procedure uses separation steps, i.e. centrifugation and ultra‐filtration. The free dsDNA was stained with PicoGreen® and determined fluorimetrically. Samples from different soils, different soil horizons, soil waters and under different land use systems were analyzed. It was found that in nearly all samples free DNA was detectable. Free DNA concentrations of up to 1950 ng (g dried sample)—1 could be detected depending on depth, soil type and system of land use.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Allemagne</li>
</country>
<region>
<li>Basse-Saxe</li>
<li>Rhénanie-Palatinat</li>
</region>
<settlement>
<li>Göttingen</li>
<li>Trèves (Allemagne)</li>
</settlement>
<orgName>
<li>Université de Trèves</li>
</orgName>
</list>
<tree>
<country name="Allemagne">
<region name="Rhénanie-Palatinat">
<name sortKey="Niemeyer, Jurgen" sort="Niemeyer, Jurgen" uniqKey="Niemeyer J" first="Jürgen" last="Niemeyer">Jürgen Niemeyer</name>
</region>
<name sortKey="Gessler, Frank" sort="Gessler, Frank" uniqKey="Gessler F" first="Frank" last="Gessler">Frank Gessler</name>
<name sortKey="Gessler, Frank" sort="Gessler, Frank" uniqKey="Gessler F" first="Frank" last="Gessler">Frank Gessler</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Rhénanie/explor/UnivTrevesV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001C57 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001C57 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Rhénanie
   |area=    UnivTrevesV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     ISTEX:F7C00836578BCC7AA64F1E617900A5617B4C0240
   |texte=   Determination of free DNA in soils
}}

Wicri

This area was generated with Dilib version V0.6.31.
Data generation: Sat Jul 22 16:29:01 2017. Site generation: Wed Feb 28 14:55:37 2024